Expassy

Protein identification and analysis software performs a central role in the investigation expassy proteins from two-dimensional 2-D gels and mass spectrometry. For protein identification, expassy, the user matches certain empirically acquired information against a protein database to define a protein expassy already known or as novel.

Federal government websites often end in. The site is secure. It provides access to a variety of databases and analytical tools dedicated to proteins and proteomics. Analysis tools are available for specific tasks relevant to proteomics, similarity searches, pattern and profile searches, post-translational modification prediction, topology prediction, primary, secondary and tertiary structure analysis and sequence alignment. These databases and tools are tightly interlinked: a special emphasis is placed on integration of database entries with related resources developed at the SIB and elsewhere, and the proteomics tools have been designed to read the annotations in SWISS-PROT in order to enhance their predictions. In addition to the main site in Switzerland, seven mirror sites in different continents currently serve the user community.

Expassy

The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors. It has now evolved, becoming an extensible and integrative portal accessing many scientific resources, databases and software tools in different areas of life sciences. Specifically, a single web portal provides a common entry point to a wide range of resources developed and operated by different SIB groups and external institutions. Additionally, the availability and usage of resources are monitored. The portal is aimed for both expert users and people who are not familiar with a specific domain in life sciences. The new web interface provides, in particular, visual guidance for newcomers to ExPASy. We have now turned it into a bioinformatics resource portal that serves not only the field of proteomics but also other domains of life sciences. The major changes and their rationale are described below:. However, in the last decade, the SIB has grown to a Swiss-wide institute that covers all major bioinformatics domains, including proteomics, genomics, transcriptomics, evolution, systems biology, etc. One goal of the new ExPASy portal is to serve as entry point to all scientific databases and tools provided by the SIB, and we revisited the original focus on proteomics accordingly;. With the inclusion of resources from more than 20 groups in five different cities Geneva, Lausanne, Berne, Basel and Zurich , located at seven Swiss higher education institutions, ExPASy has been turned into a federated portal that provides access to resources at different locations.

References Boeckmann, B.

Hide the news. Posted Invalid Date -. Explore high-quality biological data resources. Evolution biology. Population genetics. Drug design. Medicinal chemistry.

Hide the news. Posted Invalid Date -. Explore high-quality biological data resources. Evolution biology. Population genetics. Drug design.

Expassy

Federal government websites often end in. The site is secure. Expasy is available at www. This website is free and open to all users and there is no login requirement. In , Expasy was redesigned through a user-centric approach, known as User-Centred Design UCD , whose aim is to create user interfaces that are easy-to-use, efficient and targeting the intended community. This approach, widely used in other fields such as marketing, e-commerce, and design of mobile applications, is still scarcely explored in bioinformatics.

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As a library, NLM provides access to scientific literature. Some 50 predefined scales are available, such as the Doolittle and Kyte hydrophobicity scale. Tools Tools. Electrophoresis , 14 , — Electrophoresis , 18 , — Category Commons. Personalized Information Retrieval in biomedical literature. Submit Cancel. Oxford Academic. However, both pages are static and are currently no longer maintained. Skip to main content. Proteomics , 2 , —

Federal government websites often end in. The site is secure.

Proteomics tools AACompIdent 17 identifies a protein by its amino acid composition. Specifically, a single web portal provides a common entry point to a wide range of resources developed and operated by different SIB groups and external institutions. Electrophoresis 16 , — The repackaging also resulted in new URLs for most of the resources, i. Please check for further notifications by email. ExPASy mirror sites are located in academic institutions that have shown an active interest in hosting such sites. Overview of resources that can be queried via the cross-resource search interface A Query all databases. Peitsch M. Google Scholar Gill, S. This approach, widely used in other fields such as marketing, e-commerce, and design of mobile applications, is still scarcely explored in bioinformatics.